STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VCM8Putative glucose-inhibited division family A protein. (711 aa)    
Predicted Functional Partners:
A0A251TFV3
Putative tRNA modification GTPase, putative; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
 
 0.952
A0A251T200
Putative GTP binding protein.
  
 0.903
A0A251UE44
Putative GTP-binding family protein.
  
 0.903
A0A251UD74
Putative transferase,tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
 0.843
PEL1
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.473
TADA2
Transcriptional adapter.
      
 0.465
DUT
Putative deoxyuridine 5'-triphosphate nucleotidohydrolase.
  
  
 0.442
A0A251USU3
Putative deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase.
  
  
 0.442
A0A251RUL3
Putative cysteinyl-tRNA synthetase, class Ia family protein.
  
  
 0.440
SYCOARATH
Putative cysteinyl-tRNA synthetase, class Ia family protein.
  
  
 0.440
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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