STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VHM8Putative peptidase M24, structural domain-containing protein. (225 aa)    
Predicted Functional Partners:
A0A251SBZ4
Putative ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein.
  
  
 0.712
A0A251S065
Putative dihydrolipoamide succinyltransferase.
   
 0.601
OVA5
Lysine--tRNA ligase.
   
 
 0.596
SYK
Lysine--tRNA ligase.
   
 
 0.596
ATKRS-1
Lysine--tRNA ligase.
   
 
 0.596
A0A251RLZ9
Putative arfaptin homology (AH) domain/BAR domain protein.
   
 0.585
A0A251RQK8
Putative BAR domain, Arfaptin homology (AH) domain/BAR domain protein.
   
 0.585
A0A251RS10
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.585
ODPB3
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.585
A0A251RYT1
Putative arfaptin homology (AH) domain/BAR domain protein.
   
 0.585
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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