STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYBPutative phytochrome B. (1099 aa)    
Predicted Functional Partners:
PIF3
Putative phytochrome interacting factor 3.
    
 0.984
A0A251RZL7
Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
    
 0.960
ELF3
Putative hydroxyproline-rich glycoprotein family protein.
    
 0.960
A0A251UMZ8
Uncharacterized protein.
    
 0.931
A0A251RLL9
Uncharacterized protein.
    
 0.924
A0A251VGS4
Uncharacterized protein.
    
 0.924
PHYB-2
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
  
  
 
0.900
CRY2
Putative cryptochrome 2.
   
 
 0.827
CRY1
Putative cryptochrome 1.
   
 
 0.798
PIL5
Putative phytochrome interacting factor 3-like 5.
    
 
 0.765
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.