STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VKY1Putative nucleophile aminohydrolase. (252 aa)    
Predicted Functional Partners:
ATCDC5
Putative cell division cycle 5.
   
 0.857
A0A251TNY2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.824
A0A251VBB4
Splicing factor subunit; Belongs to the SF3B5 family.
   
 
 0.794
A0A251RP80
Putative zinc finger, CCHC-type.
   
 
 0.753
A0A251SM11
Putative splicing factor-related protein.
   
 
 0.753
A0A251VIN0
Putative RNA-binding KH domain-containing protein.
   
 
 0.753
RUXF
Putative small nuclear ribonucleoprotein F.
   
 
 0.749
RUXF-2
Putative small nuclear ribonucleoprotein F.
   
 
 0.749
SF3B1
Putative U2 snRNP component prp10.
   
 
 0.746
A0A251VKM7
Putative splicing factor, putative.
   
 
 0.746
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.