STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VL48Putative leucine-rich repeat transmembrane protein kinase. (1000 aa)    
Predicted Functional Partners:
A0A251SKU2
Putative jmjC domain, JmjN domain, Zinc finger C2H2-type/integrase DNA-binding domain protein.
    
 0.741
A0A251UCK5
Putative jmjC domain, JmjN domain, Zinc finger C2H2-type/integrase DNA-binding domain protein.
    
 0.741
RS27A
Putative ubiquitin-40S ribosomal protein S27a.
   
  0.688
A0A251T2C4
Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.
   
  0.688
NRPB9A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.681
RPB4
Putative DNA-directed RNA polymerase II subunit rpb4.
    
  0.679
A0A251SP40
Uncharacterized protein.
    
  0.678
A0A251V557
Putative zinc ion binding,DNA binding protein.
    
  0.678
A0A251VST7
Uncharacterized protein.
    
  0.678
A0A251RR84
Putative SNF2-related, N-terminal domain-containing protein.
    
 0.662
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.