STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB2Putative damaged DNA binding 2. (559 aa)    
Predicted Functional Partners:
ATCSA-1
Putative transducin/WD40 repeat-like superfamily protein.
    
 0.977
DDB1
Putative DNA damage-binding protein 1.
    
 0.960
A0A251UZS3
Putative cleavage/polyadenylation specificity factor, A subunit.
    
 0.960
DET1
Putative light-mediated development protein DET1.
     
 0.956
ATRAD4
Putative DNA repair protein Rad4 family.
   
 0.929
A0A251SCI1
Putative WD40/YVTN repeat-like-containing domain-containing protein.
    
 0.913
RUP2
Putative transducin/WD40 repeat-like superfamily protein.
    
 0.913
A0A251RZV5
Putative zinc finger, RING/FYVE/PHD-type, WD40/YVTN repeat-like-containing domain protein.
     
 0.903
COP1
Putative transducin/WD40 repeat-like superfamily protein.
     
 0.903
A0A251TFP4
Putative coatomer beta' subunit (COPB2).
     
 0.900
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.