STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTI6Putative pathogenesis-related transcriptional activator PTI6. (267 aa)    
Predicted Functional Partners:
CRF5
Putative cytokinin response factor 5.
     
 
0.900
A0A251U9Y0
Putative AP2/ERF transcription factor ERF/PTI6.
     
 
0.900
LBD16
Putative lateral organ boundaries-domain 16.
      
 0.499
CHR9
Putative switch 2.
      
 0.497
CHR8
Putative chromatin remodeling 8.
      
 0.493
CHR2
Putative transcription regulatory protein SNF2, putative.
      
 0.469
CHR5
Putative chromatin remodeling 5.
      
 0.469
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.