STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBP5-2Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (943 aa)    
Predicted Functional Partners:
A0A251ULY1
Uncharacterized protein.
   
   0.677
RK24
Putative 50S ribosomal protein L24 protein; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.645
A0A251UJC4
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.637
RKP
Putative related to KPC1.
   
 0.621
A0A251T5I0
Uncharacterized protein.
   
 0.621
A0A251T8Q0
Uncharacterized protein.
   
 0.621
A0A251TCA2
Uncharacterized protein.
   
 0.621
A0A251TJ21
Putative B30.2/SPRY domain-containing protein.
   
 0.621
RK10
Putative 50S ribosomal protein L10 protein.
   
 
 0.621
A0A251UG36
Putative ribosomal L5P family protein.
   
 
 0.594
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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