STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB6Putative ras-related small GTP-binding family protein. (208 aa)    
Predicted Functional Partners:
A0A251V165
Putative quinoprotein amine dehydrogenase, beta chain-like protein.
    
 0.935
GDIA
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.884
A0A251S794
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.884
GDIA-2
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.884
ATGDI1
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.884
A0A251T4J7
Putative sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.881
A0A251TUT5
Putative sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.881
A0A251V741
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.868
A0A251TNH5
Putative vps52.
    
 0.850
POK
Putative vps52 / Sac2 family.
    
 0.850
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.