STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VRB7Putative ubiquitin. (373 aa)    
Predicted Functional Partners:
A0A251RXD3
Putative PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein.
   
 0.934
A0A251TJ94
Putative PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein.
   
 0.934
A0A251S5P3
Putative zinc finger, ZZ-type, Zinc finger, RING/FYVE/PHD-type.
   
 0.832
A0A251TU46
Putative zinc finger, ZZ-type, Zinc finger, RING/FYVE/PHD-type.
   
 0.832
A0A251VQ89
Putative zinc finger, ZZ-type, Zinc finger, RING/FYVE/PHD-type.
   
 0.832
PRT1
Putative proteolysis 1.
   
 0.832
UPL4
Putative ubiquitin-protein ligase 4.
   
 0.804
A0A251V790
Putative ribosomal protein L2.
   
 0.780
A0A251T2K4
Uncharacterized protein.
   
 0.779
KAK
Putative ubiquitin-transferase.
   
 0.779
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.