STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VRG4Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor. (246 aa)    
Predicted Functional Partners:
ARA1
Putative arabinose kinase.
     
  0.800
GalAK
Putative galacturonic acid kinase.
     
  0.800
A0A251U141
Putative pectin lyase-like superfamily protein.
  
  
 
0.677
A0A251VCD6
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor.
  
  
 
0.677
A0A251TL66
Putative pectin lyase-like superfamily protein.
  
  
 
0.675
A0A251TP87
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor.
  
  
 
0.675
A0A251SS54
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor.
  
  
 
0.674
A0A251SRP8
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor; Belongs to the glycosyl hydrolase 28 family.
  
  
 
0.673
A0A251SRT0
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor.
  
  
 
0.673
A0A251SRU4
Putative glycoside hydrolase, family 28, Pectin lyase fold/virulence factor.
  
  
 
0.673
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.