STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl16Putative ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (171 aa)    
Predicted Functional Partners:
A0A251TNZ6
Putative ribosomal protein S14.
  
 
 0.931
A0A251UJC4
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.923
Rps12
NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
  
 
 0.920
rpl20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.918
A0A251TS84
Putative translation elongation factor EF1B/ribosomal protein S6 family protein.
   
 
 0.917
rps14
Putative ribosomal protein S14.
  
 
 0.916
A0A251SLE0
Putative nucleic acid-binding, OB-fold-like protein.
  
 0.911
A0A251UHM5
Putative ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.908
rpl14
Putative ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.
  
 0.907
A0A251SBZ4
Putative ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein.
   
 
 0.907
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.