STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ36655.1Phage shock protein A (PspA) family protein. (232 aa)    
Predicted Functional Partners:
SJZ35482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
    
 
 0.999
SJZ70640.1
Signal transduction histidine kinase.
    
 
 0.983
SJZ71749.1
Signal transduction histidine kinase.
    
 
 0.983
SJZ36641.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
  
    0.776
SJZ38381.1
Hypothetical protein.
 
     0.694
SJZ73937.1
Two-component system, NarL family, sensor histidine kinase DegS.
  
 
 0.605
SJZ36633.1
Hypothetical protein.
       0.508
SJZ36691.1
Thymidine phosphorylase.
       0.507
SJZ78264.1
Chromosome segregation ATPase.
  
     0.506
SJZ65076.1
Signal transduction histidine kinase.
  
    0.476
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.