STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ38128.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
SJZ38178.1
Polysaccharide deacetylase.
 
     0.896
hisI
phosphoribosyl-ATP pyrophosphatase; In the C-terminal section; belongs to the PRA-PH family.
    
  0.872
SJZ38157.1
Acyl carrier protein.
 
     0.843
SJZ38113.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
 
     0.833
SJZ89356.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.828
SJZ38137.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
     0.808
SJZ38168.1
Methyltransferase, FkbM family.
       0.771
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.735
SJZ38105.1
Hypothetical protein.
       0.672
SJZ57809.1
Predicted dehydrogenase.
 
     0.544
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.