STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ39200.1DNA primase. (586 aa)    
Predicted Functional Partners:
SJZ49651.1
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
 0.985
SJZ85350.1
Replicative DNA helicase.
 
 0.979
SJZ89412.1
DNA polymerase I.
 
 
 0.954
sigA
RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
 
  
 0.942
SJZ68105.1
Replication restart DNA helicase PriA.
  
  
  0.917
SJZ40860.1
DNA polymerase-3 subunit gamma/tau.
  
 
 0.770
SJZ36641.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
 
 
 0.762
SJZ39179.1
tRNA (adenine22-N1)-methyltransferase.
       0.758
SJZ93513.1
DNA polymerase III catalytic subunit, DnaE type.
 
 
 0.758
SJZ39168.1
Uridine kinase.
       0.755
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.