STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ41086.1Serine/threonine protein kinase. (736 aa)    
Predicted Functional Partners:
SJZ41074.1
Serine/threonine protein phosphatase PrpC.
 
  0.970
SJZ41060.1
FHA domain-containing protein.
 
 
   0.929
SJZ35482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 
 0.915
SJZ70640.1
Signal transduction histidine kinase.
  
 
 0.906
SJZ71749.1
Signal transduction histidine kinase.
    
 0.893
SKA02836.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.893
SJZ67941.1
Protein phosphatase.
  0.887
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.886
SJZ35874.1
Hypothetical protein.
     
 0.850
SJZ96808.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.845
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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