STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ44879.1Site-specific DNA-methyltransferase (adenine-specific). (243 aa)    
Predicted Functional Partners:
SJZ44912.1
DNA (cytosine-5)-methyltransferase 1.
   
 0.981
SJZ44932.1
AAA domain (dynein-related subfamily).
 
     0.871
SJZ44952.1
LlaJI restriction endonuclease.
 
     0.857
SJZ44812.1
DNA (cytosine-5)-methyltransferase 1.
 
   
 0.775
SJZ44840.1
Helicase conserved C-terminal domain-containing protein.
       0.701
SJZ44829.1
Hypothetical protein.
       0.697
SJZ44860.1
Protein of unknown function.
       0.697
SJZ44964.1
Hypothetical protein.
       0.620
SJZ44999.1
SMI1 / KNR4 family (SUKH-1).
       0.620
SJZ44785.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.578
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.