STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ45710.1HNH endonuclease. (392 aa)    
Predicted Functional Partners:
SJZ44592.1
Hypothetical protein.
  
     0.649
SJZ45691.1
Acetyltransferase (GNAT) domain-containing protein.
       0.605
SJZ60921.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
     0.511
SJZ58559.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.488
SJZ98970.1
Hypothetical protein.
  
     0.479
SJZ64135.1
HKD family nuclease.
 
   
 0.452
SJZ45674.1
Hypothetical protein.
       0.446
SJZ78264.1
Chromosome segregation ATPase.
  
     0.433
SJZ40933.1
Hypothetical protein.
  
     0.431
SJZ48092.1
Ig-like domain (group 2).
  
     0.428
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.