STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ48572.1Putative ABC transport system permease protein. (758 aa)    
Predicted Functional Partners:
SJZ48594.1
Putative ABC transport system ATP-binding protein.
 
  0.921
SJZ48569.1
Na+/melibiose symporter.
 
 
 
 0.912
SJZ48544.1
Transcriptional regulator, TetR family.
 
     0.770
SJZ69109.1
Putative ABC transport system ATP-binding protein.
 
  0.751
SJZ48920.1
Putative ABC transport system ATP-binding protein.
 
  0.750
SJZ60935.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
  0.749
SJZ93401.1
Putative ABC transport system ATP-binding protein.
 
  0.748
SJZ50460.1
Putative ABC transport system ATP-binding protein.
 
  0.720
SJZ60921.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
   
  0.708
SJZ61099.1
Hypothetical protein.
   
  0.708
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.