STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ53400.1Septum formation initiator. (139 aa)    
Predicted Functional Partners:
SJZ67624.1
Protein of unknown function.
  
     0.710
SJZ91644.1
Hypothetical protein.
  
     0.670
SJZ59314.1
Oxaloacetate decarboxylase, gamma chain.
  
     0.664
SJZ61099.1
Hypothetical protein.
  
     0.635
SJZ49504.1
Hypothetical protein.
  
     0.618
SJZ73794.1
Protein of unknown function.
  
     0.611
SJZ83209.1
Hypothetical protein.
  
     0.610
SJZ83052.1
Hypothetical protein.
  
     0.604
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.596
SJZ53377.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
       0.594
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.