STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ53823.12-iminoacetate synthase. (417 aa)    
Predicted Functional Partners:
SJZ53806.1
Thiazole synthase.
 
 0.999
SJZ53847.1
Thiamine-phosphate pyrophosphorylase.
 
  
 0.940
SJZ53747.1
Sulfur carrier protein.
 
  
  0.884
SJZ53782.1
Sulfur carrier protein ThiS adenylyltransferase.
 
    0.874
SJZ53106.1
Phosphomethylpyrimidine synthase.
  
  
 0.859
SJZ35482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 
 0.839
SJZ52710.1
Thiamine-phosphate diphosphorylase.
  
  
 0.723
SJZ50573.1
Thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily.
  
  
 0.570
SJZ80311.1
Protein of unknown function.
  
  
 0.563
SJZ80439.1
Protein of unknown function.
  
  
 0.563
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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