STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ56683.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
SJZ56702.1
Hypothetical protein.
       0.671
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.631
SJZ35688.1
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase,TIGR01498.
    
  0.578
SJZ53290.1
Prephenate dehydratase.
    
  0.578
SJZ61737.1
Chorismate mutase / prephenate dehydratase.
    
  0.578
SJZ56676.1
Predicted DNA-binding protein, MmcQ/YjbR family.
 
     0.571
SJZ76857.1
Amino acid adenylation domain-containing protein.
  
  
 0.511
SJZ56792.1
Zinc transporter, ZIP family.
  
    0.502
SJZ56725.1
Exodeoxyribonuclease I subunit D.
       0.500
SJZ56774.1
Exonuclease SbcC.
       0.500
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.