STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ57908.1Polysaccharide biosynthesis protein. (402 aa)    
Predicted Functional Partners:
SJZ57932.1
Aminotransferase, LLPSF_NHT_00031 family.
 
 
  0.901
SJZ58045.1
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing).
 
 
 0.834
SJZ58593.1
Tetratricopeptide repeat-containing protein.
  
 
 0.817
SJZ58032.1
N-acetylneuraminate synthase.
 
 
 0.786
SJZ57986.1
UDP-perosamine 4-acetyltransferase.
 
    0.780
SJZ57369.1
UDP-N-acetyl-D-galactosamine dehydrogenase.
  
 
 0.741
SJZ76857.1
Amino acid adenylation domain-containing protein.
    
 0.719
SJZ57198.1
dTDP-4-amino-4,6-dideoxygalactose transaminase.
 
 
  0.707
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
  0.692
SJZ57966.1
Nucleotidyl transferase.
  
    0.691
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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