STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ60855.1Hypothetical protein. (535 aa)    
Predicted Functional Partners:
SJZ60806.1
Hypothetical protein.
       0.773
SJZ60824.1
Signal transduction histidine kinase.
       0.773
SJZ60840.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.773
SJZ60790.1
Putative ABC transport system ATP-binding protein.
       0.686
SJZ60770.1
ABC-type lipoprotein export system, ATPase component.
       0.667
SJZ60869.1
Hypothetical protein.
      
0.664
SJZ60890.1
Hypothetical protein.
      
0.664
SJZ60743.1
Hypothetical protein.
       0.625
SJZ60897.1
Putative ABC transport system permease protein.
       0.622
SJZ60921.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
       0.622
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.