STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ60897.1Putative ABC transport system permease protein. (942 aa)    
Predicted Functional Partners:
SJZ60921.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
 
 
   0.924
SJZ60935.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
 
 
   0.892
SJZ60770.1
ABC-type lipoprotein export system, ATPase component.
 
   0.833
SJZ60790.1
Putative ABC transport system ATP-binding protein.
 
   0.788
SJZ60869.1
Hypothetical protein.
       0.723
SJZ60890.1
Hypothetical protein.
       0.723
SJZ60806.1
Hypothetical protein.
       0.622
SJZ60824.1
Signal transduction histidine kinase.
       0.622
SJZ60840.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.622
SJZ60855.1
Hypothetical protein.
       0.622
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.