STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ61173.1Penicillin-binding protein 2. (958 aa)    
Predicted Functional Partners:
SJZ83117.1
Cell division protein FtsQ.
 
 0.989
SJZ61157.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 0.983
SJZ61305.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.980
SJZ61602.1
Cell division protein FtsW, lipid II flippase.
 
 0.945
SJZ36820.1
Penicillin-binding protein 1A.
 
 
 0.941
SJZ61286.1
Rod shape-determining protein MreD.
 
  
 0.939
SJZ83141.1
Cell division protein FtsW.
 
 0.916
SJZ83205.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
  
0.882
SJZ61099.1
Hypothetical protein.
 
     0.878
SJZ61570.1
Peptidoglycan glycosyltransferase.
  
  
 
0.872
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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