STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ61880.1Putative ABC transport system ATP-binding protein. (316 aa)    
Predicted Functional Partners:
SJZ61805.1
Putative ABC transport system permease protein.
 0.996
SJZ45982.1
Putative ABC transport system permease protein.
  
 0.975
SJZ93455.1
Putative ABC transport system permease protein.
  
 0.975
SJZ61906.1
HlyD family secretion protein.
 
 0.937
SJZ61823.1
Biotin-lipoyl like.
 
  0.930
SJZ64514.1
ATP-binding cassette, subfamily B.
 
     
0.802
SJZ72108.1
Putative ABC transport system permease protein.
  
 0.740
SJZ60935.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
  0.662
SJZ60921.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
   
  0.658
SJZ61099.1
Hypothetical protein.
   
  0.658
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.