STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ64437.1Signal transduction histidine kinase. (1463 aa)    
Predicted Functional Partners:
SJZ35482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
0.953
SJZ70640.1
Signal transduction histidine kinase.
 
0.936
SJZ71749.1
Signal transduction histidine kinase.
 
0.934
SKA02836.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.917
SJZ77580.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.911
SJZ73438.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.899
SJZ82734.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.899
SJZ89468.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.892
SKA06890.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.887
SJZ89356.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.830
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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