STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ66482.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
SJZ66455.1
Hypothetical protein.
 
    
0.839
SJZ66430.1
Phosphoribosylformylglycinamidine synthase.
       0.625
SJZ58559.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.573
SKA03142.1
Acetyltransferase (GNAT) domain-containing protein.
  
  
  0.572
SJZ94266.1
Nicotinamide mononucleotide transporter PnuC.
  
     0.515
SJZ66506.1
DNA replication and repair protein RecN.
       0.480
SJZ76894.1
Diaminobutyrate aminotransferase apoenzyme.
  
  
  0.448
SJZ65476.1
Xaa-Pro aminopeptidase.
    
 0.442
SJZ66312.1
Hypothetical protein.
       0.423
SJZ66359.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
       0.423
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.