STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ67071.1Twitching motility protein PilT. (351 aa)    
Predicted Functional Partners:
SJZ67049.1
Type IV pilus assembly protein PilC.
 
  
 0.931
SJZ66997.1
Type IV pilus assembly protein PilM.
 
   
 0.838
SJZ67094.1
Type IV pilus assembly protein PilB.
 
  
0.799
SJZ41332.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
 
   
 0.673
SJZ52096.1
DNA internalization-related competence protein ComEC/Rec2.
     
 0.555
SJZ67015.1
Type IV pilus assembly protein PilA.
 
   
 0.513
SJZ66965.1
Hypothetical protein.
  
  
 0.507
SJZ99822.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
   
 0.493
SJZ35482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
     
 0.483
SJZ67119.1
Putative protease.
       0.425
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.