Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ39168.1 | atpA-2 | SAMN02745110_00283 | SAMN02745110_00797 | Uridine kinase. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.421 |
| SJZ39168.1 | guaA | SAMN02745110_00283 | SAMN02745110_00674 | Uridine kinase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.448 |
| SJZ39168.1 | pyrF | SAMN02745110_00283 | SAMN02745110_00129 | Uridine kinase. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.847 |
| SJZ39168.1 | pyrH | SAMN02745110_00283 | SAMN02745110_01269 | Uridine kinase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.877 |
| SJZ67787.1 | SJZ67809.1 | SAMN02745110_01266 | SAMN02745110_01267 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.970 |
| SJZ67787.1 | frr | SAMN02745110_01266 | SAMN02745110_01268 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.812 |
| SJZ67787.1 | pyrH | SAMN02745110_01266 | SAMN02745110_01269 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.799 |
| SJZ67809.1 | SJZ67787.1 | SAMN02745110_01267 | SAMN02745110_01266 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.970 |
| SJZ67809.1 | frr | SAMN02745110_01267 | SAMN02745110_01268 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.946 |
| SJZ67809.1 | guaA | SAMN02745110_01267 | SAMN02745110_00674 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.507 |
| SJZ67809.1 | pyrH | SAMN02745110_01267 | SAMN02745110_01269 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.854 |
| SJZ67809.1 | rpsB | SAMN02745110_01267 | SAMN02745110_01199 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.426 |
| SJZ67809.1 | tsf | SAMN02745110_01267 | SAMN02745110_01198 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.467 |
| atpA-2 | SJZ39168.1 | SAMN02745110_00797 | SAMN02745110_00283 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Uridine kinase. | 0.421 |
| atpA-2 | frr | SAMN02745110_00797 | SAMN02745110_01268 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.947 |
| atpA-2 | guaA | SAMN02745110_00797 | SAMN02745110_00674 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.734 |
| atpA-2 | pyrH | SAMN02745110_00797 | SAMN02745110_01269 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.858 |
| atpA-2 | rplA | SAMN02745110_00797 | SAMN02745110_02060 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.991 |
| atpA-2 | rpsB | SAMN02745110_00797 | SAMN02745110_01199 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.989 |
| atpA-2 | tsf | SAMN02745110_00797 | SAMN02745110_01198 | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.963 |
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