STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ67941.1Protein phosphatase. (243 aa)    
Predicted Functional Partners:
SJZ67918.1
Serine/threonine protein kinase.
 0.986
SJZ68016.1
16S rRNA (cytosine967-C5)-methyltransferase.
  
    0.907
SJZ68059.1
methionyl-tRNA formyltransferase.
  
   0.900
SJZ41086.1
Serine/threonine protein kinase.
  0.887
SJZ67906.1
Ribosome biogenesis GTPase.
 
  
 0.872
rlmN
23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
    0.816
SJZ67866.1
Thiamine pyrophosphokinase.
       0.809
SJZ67887.1
Ribulose-phosphate 3-epimerase.
  
    0.779
SJZ67857.1
Na+/proline symporter.
       0.757
SJZ71843.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.629
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.