STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ69057.1His Kinase A (phospho-acceptor) domain-containing protein. (464 aa)    
Predicted Functional Partners:
SJZ69074.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.951
SJZ35482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 0.947
SJZ70640.1
Signal transduction histidine kinase.
 
 0.944
SJZ71749.1
Signal transduction histidine kinase.
 
0.929
SJZ73937.1
Two-component system, NarL family, sensor histidine kinase DegS.
  
 0.914
SJZ35874.1
Hypothetical protein.
   
 0.875
SJZ60840.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.846
SJZ93390.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.842
SJZ38293.1
Two-component system, OmpR family, response regulator VanR.
  
  0.841
SJZ60260.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.841
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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