Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ35482.1 | SJZ35874.1 | SAMN02745110_00047 | SAMN02745110_00069 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Hypothetical protein. | 0.999 |
SJZ35482.1 | SJZ38293.1 | SAMN02745110_00047 | SAMN02745110_00222 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Two-component system, OmpR family, response regulator VanR. | 0.999 |
SJZ35482.1 | SJZ60260.1 | SAMN02745110_00047 | SAMN02745110_01028 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.999 |
SJZ35482.1 | SJZ60840.1 | SAMN02745110_00047 | SAMN02745110_01053 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.999 |
SJZ35482.1 | SJZ69057.1 | SAMN02745110_00047 | SAMN02745110_01327 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.947 |
SJZ35482.1 | SJZ69074.1 | SAMN02745110_00047 | SAMN02745110_01328 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.999 |
SJZ35482.1 | SJZ70640.1 | SAMN02745110_00047 | SAMN02745110_01334 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Signal transduction histidine kinase. | 0.999 |
SJZ35482.1 | SJZ71749.1 | SAMN02745110_00047 | SAMN02745110_01372 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Signal transduction histidine kinase. | 0.999 |
SJZ35482.1 | SJZ73937.1 | SAMN02745110_00047 | SAMN02745110_01462 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | Two-component system, NarL family, sensor histidine kinase DegS. | 0.999 |
SJZ35482.1 | SJZ93390.1 | SAMN02745110_00047 | SAMN02745110_02087 | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.999 |
SJZ35874.1 | SJZ35482.1 | SAMN02745110_00069 | SAMN02745110_00047 | Hypothetical protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SJZ35874.1 | SJZ38293.1 | SAMN02745110_00069 | SAMN02745110_00222 | Hypothetical protein. | Two-component system, OmpR family, response regulator VanR. | 0.956 |
SJZ35874.1 | SJZ60260.1 | SAMN02745110_00069 | SAMN02745110_01028 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.956 |
SJZ35874.1 | SJZ60840.1 | SAMN02745110_00069 | SAMN02745110_01053 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.956 |
SJZ35874.1 | SJZ69057.1 | SAMN02745110_00069 | SAMN02745110_01327 | Hypothetical protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.875 |
SJZ35874.1 | SJZ69074.1 | SAMN02745110_00069 | SAMN02745110_01328 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.956 |
SJZ35874.1 | SJZ70640.1 | SAMN02745110_00069 | SAMN02745110_01334 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SJZ35874.1 | SJZ71749.1 | SAMN02745110_00069 | SAMN02745110_01372 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SJZ35874.1 | SJZ73937.1 | SAMN02745110_00069 | SAMN02745110_01462 | Hypothetical protein. | Two-component system, NarL family, sensor histidine kinase DegS. | 0.993 |
SJZ35874.1 | SJZ93390.1 | SAMN02745110_00069 | SAMN02745110_02087 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.956 |
page 1 of 5