STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ73193.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
SJZ73183.1
L-asparaginase.
       0.773
SJZ73160.1
Cellulose binding domain-containing protein.
       0.714
SJZ73116.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
       0.631
SJZ73131.1
Two component transcriptional regulator, LytTR family.
       0.631
SJZ73210.1
Peptidase_C39 like family protein.
       0.522
SJZ73019.1
ABC-2 type transport system permease protein.
       0.473
SJZ73046.1
ABC-2 type transport system permease protein.
       0.473
SJZ73064.1
ABC-2 type transport system ATP-binding protein.
       0.473
SJZ73102.1
ABC transporter.
       0.473
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.