STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ73278.1Alpha-galactosidase. (601 aa)    
Predicted Functional Partners:
SJZ37148.1
Beta-glucosidase.
  
  
 0.925
SJZ71766.1
Endoglucanase.
 
  
  0.911
SJZ96648.1
Beta-galactosidase.
 
  
 0.903
SJZ37160.1
Aldose 1-epimerase.
 
  
  0.877
SJZ83761.1
Beta-glucosidase.
  
  
 0.872
SJZ43062.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.869
SJZ35597.1
Fructan beta-fructosidase.
    
 0.867
SJZ41575.1
Beta-galactosidase.
    
 0.861
SKA00365.1
Alpha-amylase.
  
 
 0.856
SJZ72413.1
Predicted dehydrogenase.
 
  
  0.853
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.