STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ77310.1O-antigen ligase. (537 aa)    
Predicted Functional Partners:
SJZ58593.1
Tetratricopeptide repeat-containing protein.
  
  
 0.697
SJZ47961.1
Hypothetical protein.
  
 
 0.640
hisI
phosphoribosyl-ATP pyrophosphatase; In the C-terminal section; belongs to the PRA-PH family.
  
  
 0.546
SJZ77360.1
Hypothetical protein.
       0.484
SJZ57179.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
  
 0.444
SJZ57507.1
UDP-glucose 4-epimerase.
  
  
 0.444
SJZ57908.1
Polysaccharide biosynthesis protein.
  
  
 0.444
SJZ48104.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.432
SJZ57268.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
  
 0.432
SJZ96588.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
  
 0.432
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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