STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ77723.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
SJZ77697.1
Hypothetical protein.
 
     0.956
SJZ49469.1
Hypothetical protein.
  
     0.771
SJZ52086.1
Sporulation and spore germination.
  
     0.768
SJZ73794.1
Protein of unknown function.
  
     0.767
SJZ49504.1
Hypothetical protein.
  
     0.764
SJZ58759.1
Hypothetical protein.
  
     0.764
SJZ49543.1
Hypothetical protein.
  
     0.762
SJZ67624.1
Protein of unknown function.
  
     0.760
SJZ77631.1
YbbR domain-containing protein.
       0.760
dacA
Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.760
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.