STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ78817.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
SJZ37921.1
CAAX protease self-immunity.
    
   0.518
SJZ43265.1
Membrane protease YdiL, CAAX protease family.
    
   0.518
SJZ90845.1
Sodium transport system permease protein.
    
   0.518
SKA03046.1
Hypothetical protein.
    
   0.518
SKA03954.1
CAAX protease self-immunity.
    
   0.518
SJZ90578.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.512
SJZ95625.1
3D (Asp-Asp-Asp) domain-containing protein.
   
    0.475
SJZ78840.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
       0.462
SJZ78877.1
Hypothetical protein.
       0.462
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.