STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ80484.1Regulator of protease activity HflC, stomatin/prohibitin superfamily. (336 aa)    
Predicted Functional Partners:
SJZ53510.1
Cell division protease FtsH.
   
 0.975
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.975
SJZ80559.1
Membrane protein implicated in regulation of membrane protease activity.
 
  
 0.935
SJZ51658.1
Membrane associated serine protease, rhomboid family.
   
 0.846
SJZ58583.1
Rhomboid protease GluP.
   
 0.846
SJZ58702.1
Hypothetical protein.
   
 0.846
SJZ39168.1
Uridine kinase.
    
  0.789
SJZ89356.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
  0.770
atpA-2
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 0.750
SJZ88888.1
Molecular chaperone HtpG.
   
 0.678
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.