STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ82653.1Lysophospholipase, alpha-beta hydrolase superfamily. (331 aa)    
Predicted Functional Partners:
SJZ75234.1
4Fe-4S dicluster domain-containing protein.
   
   0.987
SJZ76857.1
Amino acid adenylation domain-containing protein.
  
 0.977
SJZ84511.1
Glycerol kinase.
 
  
 0.877
SJZ90567.1
Glycerophosphoryl diester phosphodiesterase.
    
 0.868
SJZ35811.1
Glycerophosphoryl diester phosphodiesterase.
    
 0.846
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.777
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.777
SJZ38157.1
Acyl carrier protein.
   
  0.777
acpP-3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.777
SKA01197.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
  0.635
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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