STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ83815.1GntR family transcriptional regulator / MocR family aminotransferase. (462 aa)    
Predicted Functional Partners:
SJZ68881.1
Indole-3-glycerol phosphate synthase.
     
 0.810
SJZ35688.1
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase,TIGR01498.
    
 0.725
SJZ53290.1
Prephenate dehydratase.
    
 0.725
SJZ61737.1
Chorismate mutase / prephenate dehydratase.
    
 0.725
SJZ76857.1
Amino acid adenylation domain-containing protein.
  
 
 0.672
SJZ83839.1
Ribosomal protein S18 acetylase RimI.
       0.542
SJZ70794.1
Regulatory protein, gntR family.
  
     0.437
SJZ83786.1
Ribosomal protein S18 acetylase RimI.
       0.418
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.