STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ84397.1Mor transcription activator family protein. (92 aa)    
Predicted Functional Partners:
SKA06805.1
AraC-type DNA-binding protein.
  
     0.546
SJZ84120.1
Diamine N-acetyltransferase.
 
     0.537
SJZ84411.1
DNA-binding transcriptional regulator, PadR family.
 
     0.497
SJZ89050.1
Hypothetical protein.
  
     0.493
SJZ84060.1
CubicO group peptidase, beta-lactamase class C family.
 
     0.465
SJZ84417.1
Transcriptional regulator, contains XRE-family HTH domain.
 
    0.461
SJZ84030.1
DNA-binding transcriptional regulator, MerR family.
 
     0.444
SJZ84392.1
Lactoylglutathione lyase.
       0.444
SJZ84165.1
DNA-binding transcriptional regulator, MarR family.
 
     0.442
SJZ84402.1
Hypothetical protein.
       0.429
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.