STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ84455.1CDP-ribitol ribitolphosphotransferase. (539 aa)    
Predicted Functional Partners:
SJZ93004.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.614
SJZ93016.1
ABC-2 type transport system permease protein.
 
  
 0.600
SJZ64712.1
Preprotein translocase subunit SecG.
  
  
  0.533
SJZ92788.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
 
    0.497
SJZ70921.1
Fucose 4-O-acetylase.
  
     0.490
SJZ37306.1
Hypothetical protein.
  
  
 0.470
SJZ84436.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.405
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.