STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ85155.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
SJZ85133.1
C-5 cytosine-specific DNA methylase.
       0.773
SJZ85107.1
Hypothetical protein.
       0.651
SJZ85092.1
Clp protease.
       0.630
SJZ85071.1
Hypothetical protein.
       0.613
SJZ85016.1
Hypothetical protein.
       0.604
SJZ85046.1
Hypothetical protein.
       0.604
SJZ85179.1
DNA (cytosine-5)-methyltransferase 1.
       0.513
SJZ84997.1
DNA polymerase-3 subunit alpha.
       0.474
SJZ84979.1
Cell Wall Hydrolase.
       0.450
SJZ85199.1
Hypothetical protein.
       0.449
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.