STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ91161.1ATPase family associated with various cellular activities (AAA). (507 aa)    
Predicted Functional Partners:
SJZ91131.1
Predicted metal-dependent peptidase.
 
    0.883
SJZ91180.1
Leucine rich repeat-containing protein.
       0.705
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.526
SJZ58593.1
Tetratricopeptide repeat-containing protein.
 
   
 0.507
SJZ91218.1
Na+/H+ antiporter NhaD.
       0.501
SJZ38467.1
Orotate phosphoribosyltransferase.
  
     0.475
SJZ60020.1
Arginine/lysine/ornithine decarboxylase.
  
 
   0.471
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.