Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ93123.1 | SJZ93136.1 | SAMN02745110_02074 | SAMN02745110_02075 | ATP-dependent helicase Lhr and Lhr-like helicase. | P-loop protein of unknown function. | 0.944 |
| SJZ93123.1 | SJZ93150.1 | SAMN02745110_02074 | SAMN02745110_02076 | ATP-dependent helicase Lhr and Lhr-like helicase. | TerB N-terminal domain-containing protein. | 0.944 |
| SJZ93123.1 | SJZ93178.1 | SAMN02745110_02074 | SAMN02745110_02077 | ATP-dependent helicase Lhr and Lhr-like helicase. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.408 |
| SJZ93123.1 | murC | SAMN02745110_02074 | SAMN02745110_02073 | ATP-dependent helicase Lhr and Lhr-like helicase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.451 |
| SJZ93123.1 | radA | SAMN02745110_02074 | SAMN02745110_01705 | ATP-dependent helicase Lhr and Lhr-like helicase. | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.457 |
| SJZ93123.1 | rplA | SAMN02745110_02074 | SAMN02745110_02060 | ATP-dependent helicase Lhr and Lhr-like helicase. | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.400 |
| SJZ93136.1 | SJZ93123.1 | SAMN02745110_02075 | SAMN02745110_02074 | P-loop protein of unknown function. | ATP-dependent helicase Lhr and Lhr-like helicase. | 0.944 |
| SJZ93136.1 | SJZ93150.1 | SAMN02745110_02075 | SAMN02745110_02076 | P-loop protein of unknown function. | TerB N-terminal domain-containing protein. | 0.957 |
| SJZ93136.1 | SJZ93178.1 | SAMN02745110_02075 | SAMN02745110_02077 | P-loop protein of unknown function. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.414 |
| SJZ93136.1 | murC | SAMN02745110_02075 | SAMN02745110_02073 | P-loop protein of unknown function. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.417 |
| SJZ93150.1 | SJZ93123.1 | SAMN02745110_02076 | SAMN02745110_02074 | TerB N-terminal domain-containing protein. | ATP-dependent helicase Lhr and Lhr-like helicase. | 0.944 |
| SJZ93150.1 | SJZ93136.1 | SAMN02745110_02076 | SAMN02745110_02075 | TerB N-terminal domain-containing protein. | P-loop protein of unknown function. | 0.957 |
| SJZ93150.1 | SJZ93178.1 | SAMN02745110_02076 | SAMN02745110_02077 | TerB N-terminal domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.414 |
| SJZ93150.1 | murC | SAMN02745110_02076 | SAMN02745110_02073 | TerB N-terminal domain-containing protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.417 |
| SJZ93178.1 | SJZ93123.1 | SAMN02745110_02077 | SAMN02745110_02074 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | ATP-dependent helicase Lhr and Lhr-like helicase. | 0.408 |
| SJZ93178.1 | SJZ93136.1 | SAMN02745110_02077 | SAMN02745110_02075 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | P-loop protein of unknown function. | 0.414 |
| SJZ93178.1 | SJZ93150.1 | SAMN02745110_02077 | SAMN02745110_02076 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | TerB N-terminal domain-containing protein. | 0.414 |
| murC | SJZ93123.1 | SAMN02745110_02073 | SAMN02745110_02074 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | ATP-dependent helicase Lhr and Lhr-like helicase. | 0.451 |
| murC | SJZ93136.1 | SAMN02745110_02073 | SAMN02745110_02075 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | P-loop protein of unknown function. | 0.417 |
| murC | SJZ93150.1 | SAMN02745110_02073 | SAMN02745110_02076 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | TerB N-terminal domain-containing protein. | 0.417 |
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