STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ93631.1Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-). (303 aa)    
Predicted Functional Partners:
SJZ49733.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.999
SJZ95428.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 0.998
SJZ93614.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 0.997
SJZ95392.1
Arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein.
 
 0.995
SJZ36950.1
Putative aldouronate transport system permease protein.
 
 0.991
SJZ93654.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
 0.982
SJZ88299.1
Extracellular solute-binding protein.
 
 0.968
SJZ36496.1
Spermidine/putrescine transport system permease protein.
    
 0.958
SJZ36993.1
Putative aldouronate transport system substrate-binding protein.
 
 0.880
SJZ36540.1
Spermidine/putrescine transport system ATP-binding protein.
 
  
 0.847
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.