STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ95302.1Substrate-binding protein-like domain-containing protein. (166 aa)    
Predicted Functional Partners:
SJZ95317.1
Regulatory protein, lacI family.
     0.936
SJZ36139.1
Catabolite repression HPr-like protein.
   
 
 0.799
SJZ75420.1
Ribose-5-phosphate isomerase.
    
  0.797
SJZ95487.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
     0.777
SJZ43028.1
Transcriptional regulator, LacI family.
  
     0.765
SJZ76857.1
Amino acid adenylation domain-containing protein.
    
 
 0.723
SJZ95332.1
Glycosidase.
 
 
 0.719
SJZ58136.1
Phosphotransferase system, HPr.
   
   0.585
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.573
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
   0.573
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.