STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ95487.1DNA-binding transcriptional regulator, LacI/PurR family. (331 aa)    
Predicted Functional Partners:
SJZ36139.1
Catabolite repression HPr-like protein.
   
 
 0.799
SJZ75420.1
Ribose-5-phosphate isomerase.
    
  0.797
SJZ95502.1
Arabinogalactan endo-1,4-beta-galactosidase.
 
     0.781
SJZ95302.1
Substrate-binding protein-like domain-containing protein.
 
     0.777
SJZ76857.1
Amino acid adenylation domain-containing protein.
    
 
 0.723
SJZ95332.1
Glycosidase.
 
 
 0.639
SJZ95428.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
     0.606
SJZ95405.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
     0.600
SJZ58136.1
Phosphotransferase system, HPr.
   
   0.585
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.573
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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