STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ96257.1Sirohydrochlorin cobaltochelatase. (348 aa)    
Predicted Functional Partners:
SJZ38735.1
Cobalamin synthesis G N-terminal.
 
 0.999
SKA06860.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
 
 0.988
SJZ38692.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.942
SJZ38725.1
precorrin-3B C17-methyltransferase.
 
 
 0.920
SJZ38759.1
Cobalt-precorrin 5B C1-methyltransferase.
 
  
 0.903
SJZ38597.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.872
SJZ38775.1
precorrin-8X methylmutase.
 
  
 0.836
SJZ96277.1
Hypothetical protein.
 
     0.819
SJZ96296.1
Iron complex transport system substrate-binding protein.
 
     0.744
SJZ38583.1
Cobyrinic acid a,c-diamide synthase.
 
  
 0.724
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.